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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868671.1_cds_XP_016433524.1_29673
CDS Infomation

[gene=LOC107760018] [db_xref=GeneID:107760018] [protein=ribosomal RNA large subunit methyltransferase I-like] [protein_id=XP_016433524.1] [location=complement(join(1833..1961,3701..3838,4534..4718,14017..14203,19229..19451,21068..21202,21304..21529,21672..21768))] [gbkey=CDS]
Sequence

ATGCTTCTCAGTGGCCGCCTCATGCTCAGGTCTCTATCTCTTGCGTCATCACCGGCAACC
CCTTCCCTTCAAGAAATTGCCTCTAACCACCCTGCAGGTGTTGCAAAAGTAGTGCTTAAA
AAGGGCAAGACACAACTATTTAAGGATGGAAGTCCAATGGTTTACAGTGGTGCTATTGAT
AGAGTAATTGGTAGACCACCGCCCACCACTGGGGATATTGTCCTTGTTGCTGATGGCACT
GAGAAACCAATTGGCTGGGGATTTTACAATTCTACTTCTATGTTCCGTGTCCGCCTCATG
CAGCAAGAAGAGGAAACAACACTAGACCCTTCTTGTGCGCTTAATGCGGAAAAGCTACTG
GAAACAAGAATTGCAGCTGCTGCAGAGTTGCGTAAGAATCTAGGGCTTCCGTCTGCTCAC
ACAAATGCATATCGTCTTGTTAATAGCGAAGGCGATAGACTATCAGGCCTTATTGTTGAT
ATCTTTGGAGATTTAGCTGTAATAGCTTCATCAGCTGCTTGGGTGCAGATATACCAGCAT
CAGATAACGGATTGTTTGAGTAGATTAAATAATATCAAACAGATAAGCTGGAGGCCAACT
GTTGAAATCTTGAAAGAAGAAGGCTTAGATCTTTCTGATTTGAAAAAAACAGATCTAATC
ATACCTCAAACTAGGGTAAAGGTTATGGAGAATGGAATTTCATATTGGATATCCTTGGAT
GGCCAAAAGACAGGGTTTTATGCCGATCAACGTGAAAACCGTTGCTTCTTATCTACCATT
TCAGAGGGTCGTAGAGTTCTTGACATATGTTGCTACACCGGAGGTTTTTCTCTGAATGCA
GCATCTGGCGGTGCTTTGGATGTTATCGGTGTTGATTCATCTTTGCCTGCATTGGAACTT
GCCAAAGAAAATGTTGCATTAAATGGCTTGGATTCCCAAAGGATATCTTTTCTGCGAGAA
GACGCAACTGAGTTCATGAAGGCTGCTGTTTCTAGAAACGAATCGTGGGACATAGTTATA
TTGGATCCTCCTAAATTGGCGCCTCGGAAAAAGGTCTTAAAGAGTGCGTCTGGCATGTAT
AGGAATTTGAACTATTTGGCCATGCAGTTGACAAAAAGAGGTGGTCTCCTAATGACCTGC
TCATGTTCTGGAGCTATGACCCAAAGTGGACTGTTCTTCCGCATTCTTCAGGGTGCTGCA
TCAATGGCTGGGAGGAAAATCACTGTTGTACGTCAGGCAGGAGCAGCATGTGATCATCCA
ATTGATCCTGCCTATCCAGAGGGAACATATCTCACGAATATCTTGCTTAGAGTGTTGTAG

Peptide Sequence

PEP ID

XP_016433524.1
PEP Infomation

PREDICTED: ribosomal RNA large subunit methyltransferase I-like [Nicotiana tabacum]
Sequence

MLLSGRLMLRSLSLASSPATPSLQEIASNHPAGVAKVVLKKGKTQLFKDGSPMVYSGAID
RVIGRPPPTTGDIVLVADGTEKPIGWGFYNSTSMFRVRLMQQEEETTLDPSCALNAEKLL
ETRIAAAAELRKNLGLPSAHTNAYRLVNSEGDRLSGLIVDIFGDLAVIASSAAWVQIYQH
QITDCLSRLNNIKQISWRPTVEILKEEGLDLSDLKKTDLIIPQTRVKVMENGISYWISLD
GQKTGFYADQRENRCFLSTISEGRRVLDICCYTGGFSLNAASGGALDVIGVDSSLPALEL
AKENVALNGLDSQRISFLREDATEFMKAAVSRNESWDIVILDPPKLAPRKKVLKSASGMY
RNLNYLAMQLTKRGGLLMTCSCSGAMTQSGLFFRILQGAASMAGRKITVVRQAGAACDHP
IDPAYPEGTYLTNILLRVL

Transcript Sequence

Gene sequence data has not been registered.